Module 4 : CONSTRUCTION OF DNA LIBRARIES

Lecture 4 : Construction of Genomic Library

 

 

Feature

Genomic library

cDNA library

Sequences present

Ideally, all genomic sequences

Only structural genes that are transcribed

Contents affected by :

(a)  Developmental stage

(b)  Cell type

 

No

No

 

Yes

Yes

Features of DNA insert(s) representing a gene:

(a)  Size

(b)  Introns

(c)  5´- and 3´- regulatory sequences

 

As present in genome

Present

Present

 

Ordinarily, much smaller

Absent

Absent

As compared to the genome

(a)  Enrichment of sequences

(b)  Redundancy in frequency

(c)  Variant forms of a gene

 

In amplified genomic libraries

In amplified libraries

Not possible

 

For abundant mRNAs

For rare mRNA species

For such genes, whose RNA transcripts are alternatively spliced

Table 4-4.8. Features of genomic and cDNA library

 

Bibliography

Brown TA. 2010. Gene cloning and DNA analysis: An Introduction. 6 th ed. Wiley-Blackwell.

Lodge J. 2007. Gene cloning: principles and applications. Taylor & Francis Group.

Moore DD. 2001. Genomic DNA Libraries. Current Protocols in Molecular Biology. DOI:  10.1002/0471142727.mb0501s00

Primrose SB, Twyman RM, Old RW. 2001. Principles of Gene Manipulation. Oxford: Blackwell Scientific.

Reece RJ. 2000. Analysis of Genes and Genomes. John Wiley & Sons, U.K.

Singh BD. 2008. Biotechnology: Expanding Horizons. 2nd ed. Kalyani Publishers.