Torsion Angles about Glycosidic Bonds Have only 1 or 2 Stable Positions
- Purine residues have 2 sterically allowed orientations relative to the ribose group, syn- and anti-
- For pyrimidines only the anti conformation is allowed due to steric hindrance between the sugar and the C2 of the pyrimidine.
- Most double helical nucleic acids are in the anti- conformation
- Exception is Z-DNA which has alternating anti and syn- pyrimidine and purine residues.
Figure 4.4: The sterically allowed orientations (syn- vs. anti-)of purine and pyrimidine bases with respect to their attached ribose units.
Figure 4.5: The Structure of B-DN (Ball and stick) and corresponding space-filling model viewed down the helix axis.
Figure 4.6: The Structure of Z-DNA (Ball and stick) and corresponding space-filling model viewed down the helix axis.
Figure 4.7: The Conversion of B-DNA to Z-DNA.