Materials:
- A UV/Visible spectrophotometer
- Pipettes
- Pipette tips
- Disposable microfuge tubes
- Quartz cuvettes (suitable for wavelengths smaller than 205 nm)
- Pure protein solution in a buffer (or in water)
- The buffer the protein is dissolved in (will act as the blank).
Procedure:
- Switch ‘ON' the UV/visible spectrophotometer and allow it 30 minutes warm up.
- Determine the number of tryptophans, tyrosines, and disulfide linkages present in the protein.
- Determine the molar absorption coefficient of the protein at 280 nm using equation 4.4.
- Take the buffer used for protein dissolution in the quartz cuvettes.
- The volume of buffer has to be sufficient enough to cover the entire aperture the light beam passes through and depends on the capacity of the quartz cuvette; typically cuvettes with 1 ml capacity are used.
- The volume of buffer has to be sufficient enough to cover the entire aperture the light beam passes through and depends on the capacity of the quartz cuvette; typically cuvettes with 1 ml capacity are used.
- Place the cuvettes in the reference cell and sample cell slots in the spectrophotometer.
- ‘ZERO' the baseline for the 250 – 350 nm range.
- Remove the quartz cuvette placed in the sample cell slot and discard all the contents.
- Add the same volume of the given protein solution into the cuvette and place it back in the sample cell slot.
- Record the absorbance at 280 nm
and 330 nm
- Proteins do not absorb at wavelengths higher than 320 nm; any absorbance obtained at 330 nm therefore arises due to scattering.
- If the absorbance at 280 nm does not lie between 0.05 – 1.0, dilute the protein solution in the same buffer so as to obtain an absorbance in this range.
- Proteins do not absorb at wavelengths higher than 320 nm; any absorbance obtained at 330 nm therefore arises due to scattering.
- Switch off the spectrophotometer.
- Take out the quartz cell and clean them using detergent solution and deionized water.