Module 4 : Chromatographic Methods

Lecture 24: Protein Purification using Ion Exchange Chromatography


  1. 4.  Close the stop-cock and add 20 ml of binding buffer.

    5.  Open the stop cock to a have a flow rate of not more than 0.5 ml/min .

    6.  Gently pour the swollen ion exchange matrix to obtain a column bed of 20 cm height.

    7.  Equilibrate the column with 3 bed volumes of the binding buffer.

    8.  Load 2-3 ml of the protein solution on the column.

    9.  Allow one column volume of binder buffer to pass through the column.

    10.  Set up the gradient mixer as shown in figure 24.2.

  2. Figure 24.2: A gradient mixer kept on the magnetic stirrer

  3. 11.  Connect the gradient mixture outlet to the column and try to achieve a flow rate of ~0.5 – 0.6 ml/min .

  4. 12.  Start collecting fractions of 5 ml each as soon as the NaCl gradient is set up.

  5. 13.  If the column is to be reused, regenerate it as follows:

    1. a.  Wash the column with 2 volumes of 3 M NaCl to remove any substance that might still be bound to the column.
    2. b.  Wash the column with 2-3 volumes of binding buffer containing 200 ppm sodium azide. Sodium azide prevents microbial growth in the column.

      c.  Store the column at 4°C.