Module 4 : Classical Molecular Dynamics using Gromacs
Chapter 35 : The formation of topology file of a molecule
 
   Objectives
   In this chapter you will learn the following
  • Generate the topology file of small molecule like EtOH, MeOH, DMSO, etc.
  • Generate the topology file of protein molecules like phenyl alanine etc.
  • Generate the topology file of Toluene from phenyl alanine.